HPA Sperm section dataset

Do you want to explore sperm cells on the spatial proteomics level?

Tired to get data sets without metadata that nobody understands? Looking for some more comprehensive information that what you get when you are just given a random folder of images withoiut labels? Don't worry: some of us got your back!

This growing document is going to guide you through all the aspects of the sperm data set.

History and Authors

The data set was created in 2023-2024 within the Lundberg Lab as part of a large protein atlas mapping effort to add the sperm in the Human Protein Atlas. This effort was spearheaded by Emmie Pohjanen and Jan Hansen with many more contributors (e.g. Ulrika Axelsson).

Experimental details

TBW

Data

Available

No digested files available as of now.

Raw data (/Data/Raw/)

In the hpa_sperm folder on the ell-vault you will find raw data from the Opera Phenix microscope, where this data set was acquired. These were then processed and uploaded to the HPA LIMS.